momentuHMM

MaRDI QIDQ33478swMATHCRANFDO

Authors Brett T. Mcclintock, Theo Michelot

Last update 25 November 2025

Copyright license GNU General Public License, version 3.0

Software version identifier 1.5.5, PACKAGES.rds, 1.0.0, 1.0.1, 1.1.0, 1.1.1, 1.2.0, 1.3.0, 1.4.0, 1.4.1, 1.4.2, 1.4.3, 1.5.0, 1.5.1, 1.5.2, 1.5.3, 1.5.4, 1.5.6, 1.5.7, 1.5.8

Official website https://cran.r-project.org/web/packages/momentuHMM/index.html

Source code repository https://github.com/cran/momentuHMM

Description

Extended tools for analyzing telemetry data using generalized hidden Markov models. Features of momentuHMM (pronounced “momentum”) include data pre-processing and visualization, fitting HMMs to location and auxiliary biotelemetry or environmental data, biased and correlated random walk movement models, hierarchical HMMs, multiple imputation for incorporating location measurement error and missing data, user-specified design matrices and constraints for covariate modelling of parameters, random effects, decoding of the state process, visualization of fitted models, model checking and selection, and simulation. See McClintock and Michelot (2018) <doi:10.1111/2041-210X.12995>.

Cites work

• momentuHMM: R package for generalized hidden Markov models of animal movement

Described by source

• Incorporating telemetry error into hidden Markov models of animal movement using multiple imputation

Cited in

(31)

• Guest editor's introduction to the special issue on ``Animal movement modeling
• Imputation approaches for animal movement modeling
• The conditionally autoregressive hidden Markov model (CarHMM): inferring behavioural states from animal tracking data exhibiting conditional autocorrelation
• depmixS4
• Emergence of the wrapped Cauchy distribution in mixed directional data
• mvabund
• A Bayesian Markov model with Pólya-gamma sampling for estimating individual behavior transition probabilities from accelerometer classifications
• Guest editor's introduction to the special issue on ``Hidden Markov models: theory and applications
• hmm.discnp
• LMest
• marked
• The influence of prey availability on behavioral decisions and reproductive success of a central-place forager during lactation
• moveHMM
• swim
• MSwM
• NHMM
• move
• BBMM
• ctmm
• crawl
• kotzeb0912
• amt
• BayesianAnimalTracker
• moveNT
• smam
• diveMove
• countHMM
• hmmlearn
• TwoStepCLogit
• EthoVision
• spOccupancy

This page was built for software: momentuHMM