Multi-level modelling via stochastic multi-level multiset rewriting

DOI10.1017/S0960129512000199MaRDI QIDQ4917198zbMATH OpenOpenAlexWikidataFDO

Authors Nicolas Oury, Gordon D. Plotkin

Publication date 29 April 2013

Published in Mathematical Structures in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1017/s0960129512000199

zbMATH Keywords

agentsmulti-level multisetsvirus infection

Mathematics Subject Classification ID

Grammars and rewriting systems (68Q42) Systems biology, networks (92C42)

Recommendations

• scientific article; zbMATH DE number 7626793
• Multi-level modelling under informative sampling
• Multilevel Markov Chain Monte Carlo
• scientific article; zbMATH DE number 5735168
• Latent class and finite mixture models for multilevel data sets
• Hierarchical multilinear models for multiway data
• Multilevel Gaussian graphical model for multilevel networks
• scientific article; zbMATH DE number 6672755
• Multilevel model prediction
• Multigraph representations of hierarchical loglinear models

Cites work

• A language for biochemical systems: design and formal specification
• Application of a stochastic name-passing calculus to representation and simulation of molecular processes
• BioAmbients: an abstraction for biological compartments
• Bitonal membrane systems: interactions of biological membranes
• Brane Calculi
• Computing with cells. Advances in membrane computing.
• GemCell: A generic platform for modeling multi-cellular biological systems
• Implementing collection classes with monads
• Membrane computing and brane calculi. Old, new, and future bridges
• Stochastic bigraphs
• Stochastic Calculus of Looping Sequences for the Modelling and Simulation of Cellular Pathways
• Term Rewriting and All That
• The Space and Motion of Communicating Agents

Cited in

(7)

• Nonlinear pattern matching in rule-based modeling languages
• Simulation techniques for the calculus of wrapped compartments
• Typed stochastic semantics for the calculus of looping sequences
• A Multi-level Refinement Approach for Structural Synthesis of Optimal Probabilistic Models
• Monitoring changes in dynamic multiset systems
• Semantics and efficient simulation algorithms of an expressive multilevel modeling language
• Containment in Rule-Based Models

Describes a project that uses

Uses Software

• LBS

This page was built for publication: Multi-level modelling via stochastic multi-level multiset rewriting

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q4917198)