Near-optimal algorithm to count occurrences of subsequences of a given length

DOI10.1142/S1793830917500422MaRDI QIDQ5367537zbMATH OpenDBLPWikidataFDO

Authors Jose Torres-Jimenez, Idelfonso Izquierdo-Marquez, Daniel Ramirez-Acuna, René Peralta

Publication date 20 October 2017

Published in Discrete Mathematics, Algorithms and Applications (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1142/S1793830917500422

zbMATH Keywords

counting subsequencesperfect tree

Mathematics Subject Classification ID

Combinatorics in computer science (68R05) Algorithms on strings (68W32) Analysis of algorithms (68W40)

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Cites work

• A fast algorithm for computing a longest common increasing subsequence
• Algorithms for subsequence combinatorics
• Fast computation of a longest increasing subsequence and application
• Faster Algorithms for Computing Longest Common Increasing Subsequences
• Subsequence Combinatorics and Applications to Microarray Production, DNA Sequencing and Chaining Algorithms
• The String-to-String Correction Problem

Cited in

(7)

• Efficient counting of square substrings in a tree
• Algorithms for subsequence combinatorics
• Near Linear Time Construction of an Approximate Index for All Maximum Consecutive Sub-sums of a Sequence
• On the Number of Subsequences When Deleting Symbols From a String
• Detecting k-(Sub-)Cadences and Equidistant Subsequence Occurrences
• The submatrices character count problem: An efficient solution using separable values
• AWLCO: All-Window Length Co-Occurrence

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