Network estimation in state space models with L1-regularization constraint

MaRDI QIDQ2408320zbMATH OpenFDO

Authors Lotsi Anani, Ernst C. Wit

Publication date 12 October 2017

Published in Afrika Statistika (Search for Journal in Brave)

Full work available at URL https://projecteuclid.org/euclid.as/1505354423

zbMATH Keywords

EM algorithmstate space modelgene expressionmicroarraysparsegenomic

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Estimation in multivariate analysis (62H12) Ridge regression; shrinkage estimators (Lasso) (62J07) Protein sequences, DNA sequences (92D20)

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(9)

• Sparse estimation in linear dynamic networks using the stable spline horseshoe prior
• Weighted-LASSO for structured network inference from time course data
• High-dimensional ODEs coupled with mixed-effects modeling techniques for dynamic gene regulatory network identification
• Sparse additive ordinary differential equations for dynamic gene regulatory network modeling
• Maximum likelihood estimation based on the Laplace approximation for p₂ network regression models
• Gene feature interference deconvolution
• A network Lasso model for regression
• Sparse regulatory networks
• A Bayesian approach to sparse dynamic network identification

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