Optimal false discovery rate control with kernel density estimation in a microarray experiment

DOI10.1080/03610918.2013.875569MaRDI QIDQ3178487zbMATH OpenOpenAlexFDO

Authors Moonsu Kang

Publication date 14 July 2016

Published in Communications in Statistics. Simulation and Computation (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1080/03610918.2013.875569

zbMATH Keywords

false discovery ratefalse nondiscovery ratekernel density estimationmicroarray dataPoisson approximation

Mathematics Subject Classification ID

Density estimation (62G07) Estimation in multivariate analysis (62H12)

Recommendations

• Estimation procedures for the false discovery rate: a systematic comparison for microarray data
• Estimation of False Discovery Rates in Multiple Testing: Application to Gene Microarray Data
• Optimal false discovery rate control for dependent data
• On estimating the proportion of true null hypotheses for false discovery rate controlling procedures in exploratory DNA microarray studies
• The control of the false discovery rate in multiple testing under dependency.

Cites work

• A Direct Approach to False Discovery Rates
• Bivariate high-level exceedance and the Chen-Stein theorem in genomics multiple hypothesis testing perspectives
• Data-driven bandwidth choice for density estimation based on dependent data
• False discovery rate for scanning statistics
• FDR-controlling stepwise procedures and their false negatives rates
• Kendall's tau-type rank statistics in genome data.
• Multiple hypothesis testing in microarray experiments.
• On bandwidth choice for density estimation with dependent data
• On false discovery control under dependence
• On optimality of stepdown and stepup multiple test procedures
• Poisson approximation for dependent trials
• Significance analysis of microarrays applied to the ionizing radiation response
• Strong Control, Conservative Point Estimation and Simultaneous Conservative Consistency of False Discovery Rates: A Unified Approach
• The control of the false discovery rate in multiple testing under dependency.

Cited in

(3)

• Estimation procedures for the false discovery rate: a systematic comparison for microarray data
• Optimal false discovery rate control for dependent data
• Inference on the Limiting False Discovery Rate and the P-value Threshold Parameter Assuming Weak Dependence between Gene Expression Levels within Subject

This page was built for publication: Optimal false discovery rate control with kernel density estimation in a microarray experiment

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3178487)