PAC

Authors Ye Henry Li, Dangna Li

Last update 15 December 2025

Copyright license GNU General Public License, version 3.0

Software version identifier 1.1.4, PACKAGES.rds, 1.0.0, 1.0.1, 1.0.2, 1.0.3, 1.0.5, 1.0.6, 1.0.7, 1.0.8, 1.0.9, 1.0.10, 1.1.0, 1.1.1, 1.1.2, 1.1.3, 1.1.6

Description

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) <doi:10.1371/journal.pcbi.1005875> for detail method description.

Cites work

Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks

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