| Publication | Date of Publication | Type |
|---|
Undesignable motifs in structural RNAs and combinatorial consequences (edit)
Journal of Mathematical Biology | 2026-03-31 | Paper |
| A graph-theoretic barcode ordering model for linked-reads | 2023-02-07 | Paper |
PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals
Algorithms for Computational Biology | 2022-10-13 | Paper |
| A mixed integer linear programming algorithm for plasmid binning | 2022-08-11 | Paper |
| PRINCE: accurate approximation of the copy number of tandem repeats | 2022-07-18 | Paper |
The potential of family-free genome comparison
Models and Algorithms for Genome Evolution | 2021-06-10 | Paper |
Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models
Journal of Mathematical Biology | 2020-03-05 | Paper |
An exact enumeration of distance-hereditary graphs
2017 Proceedings of the Fourteenth Workshop on Analytic Algorithmics and Combinatorics (ANALCO) | 2019-09-17 | Paper |
Counting, Generating, Analyzing and Sampling Tree Alignments
International Journal of Foundations of Computer Science | 2018-09-20 | Paper |
| The gene family-free median of three | 2018-03-23 | Paper |
The gene family-free median of three
(available as arXiv preprint) | 2018-03-23 | Paper |
Counting, Generating and Sampling Tree Alignments
Algorithms for Computational Biology | 2016-10-06 | Paper |
Hypergraph covering problems motivated by genome assembly questions
Lecture Notes in Computer Science | 2014-01-17 | Paper |
On the gapped consecutive-ones property
Electronic Notes in Discrete Mathematics | 2013-10-10 | Paper |
Hardness results on the gapped consecutive-ones property problem
Discrete Applied Mathematics | 2012-11-22 | Paper |
A tight bound on the length of odd cycles in the incompatibility graph of a non-C1P matrix
Information Processing Letters | 2012-10-23 | Paper |
Efficient chaining of seeds in ordered trees
Journal of Discrete Algorithms | 2012-09-13 | Paper |
Average-case analysis of perfect sorting by reversals
Discrete Mathematics, Algorithms and Applications | 2012-06-12 | Paper |
Tractability results for the consecutive-ones property with multiplicity
Combinatorial Pattern Matching | 2011-06-29 | Paper |
Efficient Chaining of Seeds in Ordered Trees
Lecture Notes in Computer Science | 2011-05-19 | Paper |
A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes
Theoretical Computer Science | 2011-02-21 | Paper |
An approximation algorithm for computing a parsimonious first speciation in the gene duplication model
Comparative Genomics | 2010-10-19 | Paper |
Breakpoint Distance and PQ-Trees
Combinatorial Pattern Matching | 2010-07-26 | Paper |
A more efficient algorithm for perfect sorting by reversals
Information Processing Letters | 2010-04-19 | Paper |
Combinatorial operators for Kronecker powers of representations of \(\mathfrak S_n\).
Séminaire Lotharingien de Combinatoire | 2010-01-19 | Paper |
Combinatorial operators for Kronecker powers of representations of \(\mathfrak S_n\).
Séminaire Lotharingien de Combinatoire | 2010-01-19 | Paper |
Combinatorial operators for Kronecker powers of representations of \(\mathfrak S_n\).
Séminaire Lotharingien de Combinatoire | 2010-01-19 | Paper |
Minimal Conflicting Sets for the Consecutive Ones Property in Ancestral Genome Reconstruction
Comparative Genomics | 2009-10-28 | Paper |
Computing Common Intervals of <i>K</i> Permutations, with Applications to Modular Decomposition of Graphs
SIAM Journal on Discrete Mathematics | 2009-08-20 | Paper |
Average-Case Analysis of Perfect Sorting by Reversals
Combinatorial Pattern Matching | 2009-07-07 | Paper |
Genomes Containing Duplicates Are Hard to Compare
Computational Science – ICCS 2006 | 2008-12-09 | Paper |
Comparative Genomics
Lecture Notes in Computer Science | 2006-10-19 | Paper |
Algorithms – ESA 2005
Lecture Notes in Computer Science | 2006-06-27 | Paper |
On maximal instances for the original syntenic distance
Theoretical Computer Science | 2005-01-11 | Paper |
Two bijective proofs for the arborescent form of the Good-Lagrange formula and some applications to colored rooted trees and cacti
Theoretical Computer Science | 2004-10-27 | Paper |
| scientific article; zbMATH DE number 1919510 (Why is no real title available?) | 2003-05-27 | Paper |
| scientific article; zbMATH DE number 1919510 (Why is no real title available?) | 2003-05-27 | Paper |
Tree pattern matching with a more general notion of occurrence of the pattern.
Information Processing Letters | 2003-01-21 | Paper |
A geometric version of the Robinson-Schensted correspondence for skew oscillating tableaux
Discrete Mathematics | 2002-05-15 | Paper |
A generalization of the results of Kreweras on the enumeration polynomial of inversions in arborescences
Annales des Sciences Mathématiques du Québec | 2001-12-05 | Paper |
Enumerating alternating trees
Journal of Combinatorial Theory. Series A | 2001-10-29 | Paper |
| scientific article; zbMATH DE number 1504579 (Why is no real title available?) | 2001-06-13 | Paper |
| scientific article; zbMATH DE number 1552328 (Why is no real title available?) | 2001-03-19 | Paper |
