| Publication | Date of Publication | Type |
|---|
Chemical mass-action systems as analog computers: implementing arithmetic computations at specified speed
Theoretical Computer Science | 2024-12-12 | Paper |
| A new path method for exponential ergodicity of Markov processes on $\mathbb Z^d$, with applications to stochastic reaction networks | 2023-09-13 | Paper |
Results on stochastic reaction networks with non-mass action kinetics
Mathematical Biosciences and Engineering | 2022-11-02 | Paper |
| Mixing times for two classes of stochastically modeled reaction networks | 2022-09-14 | Paper |
Prevalence of deficiency-zero reaction networks in an Erdős-Rényi framework
Journal of Applied Probability | 2022-07-08 | Paper |
Conditional Monte Carlo for reaction networks
SIAM Journal on Scientific Computing | 2022-05-11 | Paper |
Deficiency zero for random reaction networks under a stochastic block model framework
Journal of Mathematical Chemistry | 2021-09-28 | Paper |
Tier structure of strongly endotactic reaction networks
Stochastic Processes and their Applications | 2021-02-18 | Paper |
Stochastically modeled weakly reversible reaction networks with a single linkage class
Journal of Applied Probability | 2020-12-11 | Paper |
Variance of finite difference methods for reaction networks with non-Lipschitz rate functions
SIAM Journal on Numerical Analysis | 2020-11-18 | Paper |
On classes of reaction networks and their associated polynomial dynamical systems
Journal of Mathematical Chemistry | 2020-09-24 | Paper |
Time-dependent product-form Poisson distributions for reaction networks with higher order complexes
Journal of Mathematical Biology | 2020-05-23 | Paper |
Stochastic chemical reaction networks for robustly approximating arbitrary probability distributions
Theoretical Computer Science | 2019-11-22 | Paper |
Discrepancies between extinction events and boundary equilibria in reaction networks
Journal of Mathematical Biology | 2019-10-22 | Paper |
Low variance couplings for stochastic models of intracellular processes with time-dependent rate functions
Bulletin of Mathematical Biology | 2019-09-26 | Paper |
Stochastic representations of ion channel kinetics and exact stochastic simulation of neuronal dynamics
Journal of Computational Neuroscience | 2019-03-25 | Paper |
On constrained Langevin equations and (bio)chemical reaction networks
Multiscale Modeling & Simulation | 2019-03-11 | Paper |
Non-explosivity of stochastically modeled reaction networks that are complex balanced
Bulletin of Mathematical Biology | 2018-10-24 | Paper |
Some network conditions for positive recurrence of stochastically modeled reaction networks
SIAM Journal on Applied Mathematics | 2018-10-18 | Paper |
Computational Complexity Analysis for Monte Carlo Approximations of Classically Scaled Population Processes
Multiscale Modeling & Simulation | 2018-10-15 | Paper |
Conditions for extinction events in chemical reaction networks with discrete state spaces
Journal of Mathematical Biology | 2018-04-11 | Paper |
| Introduction to probability | 2017-11-23 | Paper |
Finite Time Distributions of Stochastically Modeled Chemical Systems with Absolute Concentration Robustness
SIAM Journal on Applied Dynamical Systems | 2017-08-24 | Paper |
Product-form stationary distributions for deficiency zero networks with non-mass action kinetics
Bulletin of Mathematical Biology | 2017-03-28 | Paper |
A functional central limit theorem for a Markov-modulated infinite-server queue
Methodology and Computing in Applied Probability | 2016-04-12 | Paper |
Multilevel Monte Carlo for stochastic differential equations with small noise
SIAM Journal on Numerical Analysis | 2016-03-16 | Paper |
Lyapunov functions, stationary distributions, and non-equilibrium potential for reaction networks
Bulletin of Mathematical Biology | 2016-01-13 | Paper |
Lyapunov functions, stationary distributions, and non-equilibrium potential for reaction networks
Bulletin of Mathematical Biology | 2016-01-13 | Paper |
An asymptotic relationship between coupling methods for stochastically modeled population processes
IMA Journal of Numerical Analysis | 2015-11-06 | Paper |
Complexity of Multilevel Monte Carlo Tau-Leaping
SIAM Journal on Numerical Analysis | 2015-04-08 | Paper |
Complexity of Multilevel Monte Carlo Tau-Leaping
SIAM Journal on Numerical Analysis | 2015-04-08 | Paper |
| Stochastic analysis of biochemical systems | 2015-04-07 | Paper |
| Hybrid Pathwise Sensitivity Methods for Discrete Stochastic Models of Chemical Reaction Systems | 2014-08-15 | Paper |
A weak trapezoidal method for a class of stochastic differential equations
Communications in Mathematical Sciences | 2014-01-22 | Paper |
A weak trapezoidal method for a class of stochastic differential equations
Communications in Mathematical Sciences | 2014-01-22 | Paper |
| Stochastic analysis of biochemical reaction networks with absolute concentration robustness | 2013-10-14 | Paper |
An efficient finite difference method for parameter sensitivities of continuous time Markov chains
SIAM Journal on Numerical Analysis | 2013-01-24 | Paper |
Multilevel Monte Carlo for continuous time Markov chains, with applications in biochemical kinetics
Multiscale Modeling & Simulation | 2012-08-30 | Paper |
Multilevel Monte Carlo for continuous time Markov chains, with applications in biochemical kinetics
Multiscale Modeling & Simulation | 2012-08-30 | Paper |
Boundedness of trajectories for weakly reversible, single linkage class reaction systems
Journal of Mathematical Chemistry | 2012-01-13 | Paper |
Error analysis of tau-leap simulation methods
The Annals of Applied Probability | 2012-01-10 | Paper |
A proof of the global attractor conjecture in the single linkage class case
SIAM Journal on Applied Mathematics | 2011-11-10 | Paper |
The dynamics of weakly reversible population processes near facets
SIAM Journal on Applied Mathematics | 2011-01-17 | Paper |
Product-form stationary distributions for deficiency zero chemical reaction networks
Bulletin of Mathematical Biology | 2010-12-14 | Paper |
Propagation of fluctuations in biochemical systems. I: Linear SSC networks
Bulletin of Mathematical Biology | 2008-04-22 | Paper |
| Propagation of Fluctuations in Biochemical Systems, II: Nonlinear Chains | 2007-08-02 | Paper |
Chemical mass-action systems as analog computers: implementing arithmetic computations at specified speed
(available as arXiv preprint) | N/A | Paper |
