| Publication | Date of Publication | Type |
|---|
| New algorithms for structure informed genome rearrangement | 2024-08-13 | Paper |
Learning of Structurally Unambiguous Probabilistic Grammars
Logical Methods in Computer Science | 2023-03-22 | Paper |
| Approximate search for known gene clusters in new genomes using PQ-trees | 2023-02-07 | Paper |
| scientific article; zbMATH DE number 7559171 (Why is no real title available?) | 2022-07-18 | Paper |
On almost Monge all scores matrices
Algorithmica | 2019-01-11 | Paper |
| A biclique approach to reference anchored gene blocks and its applications to pathogenicity islands | 2018-03-23 | Paper |
| scientific article; zbMATH DE number 6792426 (Why is no real title available?) | 2017-10-17 | Paper |
Algorithms for regular tree grammar network search and their application to mining human-viral infection patterns
Lecture Notes in Computer Science | 2017-07-25 | Paper |
Algorithms for path-constrained sequence alignment
Journal of Discrete Algorithms | 2014-08-13 | Paper |
The Worst Case Complexity of Maximum Parsimony
Combinatorial Pattern Matching | 2014-06-30 | Paper |
Efficient all path score computations on grid graphs
Theoretical Computer Science | 2014-03-13 | Paper |
Efficient all path score computations on grid graphs
Combinatorial Pattern Matching | 2013-06-14 | Paper |
Edit distance with duplications and contractions revisited
Combinatorial Pattern Matching | 2011-06-29 | Paper |
Regular language constrained sequence alignment revisited
Lecture Notes in Computer Science | 2011-05-19 | Paper |
Sparse RNA folding: time and space efficient algorithms
Journal of Discrete Algorithms | 2011-05-03 | Paper |
SA-REPC -- sequence alignment with regular expression path constraint
Language and Automata Theory and Applications | 2010-05-26 | Paper |
Sparse LCS Common Substring Alignment
Combinatorial Pattern Matching | 2010-04-06 | Paper |
Fast algorithms for computing tree LCS
Theoretical Computer Science | 2009-10-09 | Paper |
Speeding up HMM decoding and training by exploiting sequence repetitions
Algorithmica | 2009-08-27 | Paper |
Sparse LCS common substring alignment
Information Processing Letters | 2009-07-09 | Paper |
Sparse RNA Folding: Time and Space Efficient Algorithms
Combinatorial Pattern Matching | 2009-07-07 | Paper |
Approximate labelled subtree homeomorphism
Journal of Discrete Algorithms | 2009-05-13 | Paper |
Speeding Up HMM Decoding and Training by Exploiting Sequence Repetitions
Combinatorial Pattern Matching | 2008-06-17 | Paper |
Fast Algorithms for Computing Tree LCS
Combinatorial Pattern Matching | 2008-06-17 | Paper |
On the Repeat-Annotated Phylogenetic Tree Reconstruction Problem
Combinatorial Pattern Matching | 2007-09-14 | Paper |
A Study of Accessible Motifs and RNA Folding Complexity
Lecture Notes in Computer Science | 2007-08-30 | Paper |
Two algorithms for LCS consecutive suffix alignment
Journal of Computer and System Sciences | 2007-08-27 | Paper |
Combinatorial Pattern Matching
Lecture Notes in Computer Science | 2005-12-14 | Paper |
Research in Computational Molecular Biology
Lecture Notes in Computer Science | 2005-11-23 | Paper |
Combinatorial Pattern Matching
Lecture Notes in Computer Science | 2005-09-07 | Paper |
Combinatorial Pattern Matching
Lecture Notes in Computer Science | 2005-09-07 | Paper |
| scientific article; zbMATH DE number 2119727 (Why is no real title available?) | 2004-11-29 | Paper |
A Subquadratic Sequence Alignment Algorithm for Unrestricted Scoring Matrices
SIAM Journal on Computing | 2004-01-08 | Paper |
On the common substring alignment problem
Journal of Algorithms | 2002-07-08 | Paper |
| scientific article; zbMATH DE number 1445380 (Why is no real title available?) | 2001-04-01 | Paper |
