phoenics

Authors Remi Servien, Nathalie Vialaneix, Camille Guilmineau

Last update 2 July 2026

Copyright license GNU General Public License, version 3.0

Software version identifier PACKAGES.rds, 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.6.1

Description

Perform a differential analysis at pathway level based on metabolite quantifications and information on pathway metabolite composition. The method, described in Guilmineau et al (2025) <doi:10.1186/s12859-025-06118-z> is based on a Principal Component Analysis step and on a linear mixed model. Automatic query of metabolic pathways is also implemented.

Cites work

Phoenics: a novel statistical approach for longitudinal metabolomic pathway analysis

This page was built for software: phoenics