ProtoMol

MaRDI QIDQ22686swMATHFDO

Official website http://protomol.sourceforge.net

Described by source

• ProtoMol, an object-oriented framework for prototyping novel algorithms for molecular dynamics

Cited in

(12)

• OOMPAA
• GSHMC
• Shadow hybrid Monte Carlo: an efficient propagator in phase space of macromolecules
• NAMD2
• BALL
• SPASMS
• Parallel multigrid summation for the N-body problem
• Multiple-time-stepping generalized hybrid Monte Carlo methods
• Coupled Navier-Stokes - molecular dynamics simulations using a multi-physics flow simulation framework
• Verlet-I/R-RESPA/Impulse is Limited by Nonlinear Instabilities
• Biomolecular sampling: algorithms, test molecules, and metrics
• Computational Science - ICCS 2004

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