Psim: A Computational Platform for Metabolic P Systems

DOI10.1007/978-3-540-77312-2_1MaRDI QIDQ5452045zbMATH OpenOpenAlexFDO

Authors Luca Bianco, Alberto Castellini

Publication date 28 March 2008

Published in Membrane Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-540-77312-2_1

Mathematics Subject Classification ID

Modes of computation (nondeterministic, parallel, interactive, probabilistic, etc.) (68Q10)

Recommendations

• The metabolic algorithm for P systems: principles and applications
• Metabolic P systems for biochemical dynamics
• Membrane Computing
• Deterministic and stochastic P systems for modelling cellular processes
• Current developments on computational modeling using P systems

Cites work

• Computing with membranes
• Discrete solutions to differential equations by metabolic P systems
• DYNAMICAL PROBABILISTIC P SYSTEMS
• scientific article; zbMATH DE number 3885321 (Why is no real title available?)
• scientific article; zbMATH DE number 1296290 (Why is no real title available?)
• scientific article; zbMATH DE number 1951580 (Why is no real title available?)
• Membrane Computing
• Membrane computing. 6th international workshop, WMC 2005, Vienna, Austria, July 18--21, 2005. Revised selected and invited papers.
• Membrane computing. An introduction.
• Membrane systems with carriers
• Metabolic P systems for biochemical dynamics
• P systems with active membranes: Attacking NP-complete problems
• P systems with energy accounting^∗
• P SYSTEMS WITH REACTION MAPS
• The metabolic algorithm for P systems: principles and applications
• The power of communication: P systems with symport/antiport

Cited in

(14)

• Modelling biological processes by using a probabilistic P system software
• Comparing simulation algorithms for multienvironment probabilistic P systems over a standard virtual ecosystem
• Simulation challenges in membrane computing
• Current developments on computational modeling using P systems
• Simulation, Characterization, and Optimization of Metabolic Models with the High Performance Systems Biology Toolkit
• Psim
• scientific article; zbMATH DE number 492895 (Why is no real title available?)
• A Novel Variant of P Systems for the Modelling and Simulation of Biochemical Systems
• Spatial calculus of looping sequences
• A grammatical evolution approach to the automatic inference of P systems
• Metabolic P systems for biochemical dynamics
• Simulating FAS-induced apoptosis by using P systems
• The metabolic algorithm for P systems: principles and applications
• Hybrid functional Petri nets as MP systems

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