Distance conservation of transcription regulatory motifs in human promoters

DOI10.1016/J.COMPBIOLCHEM.2008.07.001MaRDI QIDQ1004960zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Jun Lu, Ying Zhang, Liao Fu Luo

Publication date 12 March 2009

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2008.07.001

zbMATH Keywords

distance conservationHeptamer motifshuman promoterstissue-specific motif pairstranscription regulatory motifs

Mathematics Subject Classification ID

Computational methods for problems pertaining to biology (92-08) Biochemistry, molecular biology (92C40)

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Cited in

(4)

• \textsc{motifDiverge}: a model for assessing the statistical significance of gene regulatory motif divergence between two DNA sequences
• Genome wide study of NF-Y type CCAAT boxes in unidirectional and bidirectional promoters in human and mouse
• Whole genome human/mouse phylogenetic footprinting of potential transcription regulatory signals
• Transcriptional frequency and cell determination

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