Class prediction and gene selection for DNA microarrays using regularized sliced inverse regression

DOI10.1016/j.csda.2007.02.005zbMath1452.62845OpenAlexW2076944607MaRDI QIDQ1020831

Luca Scrucca

Publication date: 2 June 2009

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.csda.2007.02.005

zbMATH Keywords

classificationregularizationdimension reductionfeature selectionmicroarraySIR

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)

Related Items (13)

Polarization of forecast densities: a new approach to time series classification ⋮ A hypothesis test using bias-adjusted AR estimators for classifying time series in small samples ⋮ A new sliced inverse regression method for multivariate response ⋮ Sparse Sufficient Dimension Reduction for Markov Blanket Discovery ⋮ A model-free variable selection method for reducing the number of redundant variables ⋮ Multiple-population shrinkage estimation via sliced inverse regression ⋮ Editorial: Computational statistics within clinical research ⋮ Adaptive clustering for time series: application for identifying cell cycle expressed genes ⋮ Editorial: Statistical genetics \& statistical genomics: where biology, epistemology, statistics, and computation collide ⋮ A sliced inverse regression approach for data stream ⋮ Editorial: Statistical learning methods including dimensionality reduction ⋮ Advanced topics in sliced inverse regression ⋮ On the asymptotic behaviour of the recursive Nadaraya–Watson estimator associated with the recursive sliced inverse regression method

Uses Software

• R
• ElemStatLearn
• sma

Cites Work

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• An extensive comparison of recent classification tools applied to microarray data
• Dimension reduction strategies for analyzing global gene expression data with a response
• Penalized discriminant analysis
• Sliced Inverse Regression for Dimension Reduction
• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
• Theory & Methods: Special Invited Paper: Dimension Reduction and Visualization in Discriminant Analysis (with discussion)
• An Adaptive Estimation of Dimension Reduction Space
• Comment
• The elements of statistical learning. Data mining, inference, and prediction
• Gene selection for cancer classification using support vector machines

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