Reproducibility of genotypes as measured by the affymetrix GeneChip^ 100K human mapping array set

DOI10.1016/J.CSDA.2008.05.020zbMATH Open1452.62806OpenAlexW2023555427WikidataQ41114330 ScholiaQ41114330MaRDI QIDQ1023919FDOQ1023919

Authors: Brooke L. Fridley, Stephen T. Turner, Arlene B. Chapman, Andrei Rodin, Eric Boerwinkle, Kent R. Bailey 

Publication date: 16 June 2009

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL: http://europepmc.org/articles/pmc2597860

Recommendations

• Incorporating duplicate genotype data into linear trend tests of genetic association: methods and cost-effectiveness
• Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data
• Increase of rejection rate in case-control studies with the differential genotyping error rates
• Susceptibility of Biallelic Haplotype and Genotype Frequencies to Genotyping Error
• Using Duplicate Genotyped Data in Genetic Analyses: Testing Association and Estimating Error Rates

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Applications of statistics to biology and medical sciences; meta analysis (62P10)

Cites Work

• Title not available (Why is that?)
• Using Duplicate Genotyped Data in Genetic Analyses: Testing Association and Estimating Error Rates
• Increasing Power for Tests of Genetic Association in the Presence of Phenotype and/or Genotype Error by Use of Double-Sampling

Cited In (4)

• On the use of the terms repeatability and reproducibility regarding ``Reproducibility of genotypes as measured by the affymetrix GeneChip(R) 100K human mapping array set
• Editorial: Statistical genetics \& statistical genomics: where biology, epistemology, statistics, and computation collide
• Using Duplicate Genotyped Data in Genetic Analyses: Testing Association and Estimating Error Rates
• Incorporating duplicate genotype data into linear trend tests of genetic association: methods and cost-effectiveness

Uses Software

• SimWalk2

This page was built for publication: Reproducibility of genotypes as measured by the affymetrix GeneChip\(^{\circledR}\) 100K human mapping array set

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q1023919)