The combinatorics and extreme value statistics of protein threading

DOI10.1007/BF01609878MaRDI QIDQ1306747zbMATH OpenFDO

Authors John L. Spouge, Aron Marchler-Bauer, Stephen Bryant

Publication date 29 January 2001

Published in Annals of Combinatorics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/BF01609878

zbMATH Keywords

extreme value statisticsPoisson clumping heuristicprobabilities related to uniform distributionsprotein threading

Mathematics Subject Classification ID

Asymptotic distribution theory in statistics (62E20) Statistics of extreme values; tail inference (62G32) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

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Cites work

• Accurate Monte Carlo estimation of very small \(p\)-values in Markov chains
• Extremal theory for stochastic processes
• scientific article; zbMATH DE number 3206649 (Why is no real title available?)
• scientific article; zbMATH DE number 3299758 (Why is no real title available?)
• scientific article; zbMATH DE number 3349081 (Why is no real title available?)
• Limit distribution of maximal non-aligned two-sequence segmental score
• Limit distributions of maximal segmental score among Markov-dependent partial sums
• Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes.
• Probability approximations via the Poisson clumping heuristic
• Two moments suffice for Poisson approximations: The Chen-Stein method

Cited in

(1)

• A statistical measure of association and a series expansion of chain conformations

Describes a project that uses

Uses Software

• BLAST

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