Clustering longitudinal profiles using P-splines and mixed effects models applied to time-course gene expression data

DOI10.1016/j.csda.2013.04.001zbMath1471.62045OpenAlexW2036937228MaRDI QIDQ1621277

E. Holian, J. P. Hinde, Norma Coffey

Publication date: 8 November 2018

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.csda.2013.04.001

zbMATH Keywords

clusteringfinite mixture modelmixed effects modeltime-course gene expressionlongitudinal profiles

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10)

Related Items (12)

Editorial: The 2nd special issue on advances in mixture models ⋮ Conditional functional clustering for longitudinal data with heterogeneous nonlinear patterns ⋮ Grouped Generalized Estimating Equations for Longitudinal Data Analysis ⋮ Boosted-oriented probabilistic smoothing-spline clustering of series ⋮ Cluster analysis of longitudinal profiles with subgroups ⋮ Functional clustering methods for binary longitudinal data with temporal heterogeneity ⋮ A new distance with derivative information for functional \(k\)-means clustering algorithm ⋮ clusterMLD: An Efficient Hierarchical Clustering Method for Multivariate Longitudinal Data ⋮ Unnamed Item ⋮ Biclustering multivariate discrete longitudinal data ⋮ Biclustering analysis of functionals via penalized fusion ⋮ Dynamic Modeling of Conditional Quantile Trajectories, With Application to Longitudinal Snippet Data

Uses Software

• fda (R)
• SemiPar

Cites Work

• Unnamed Item
• Unnamed Item
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• Cluster analysis of gene expression dynamics
• The Clustering of Regression Models Method with Applications in Gene Expression Data
• Tight Clustering: A Resampling‐Based Approach for Identifying Stable and Tight Patterns in Data
• Self-organizing maps.

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