On the reconstruction of three-dimensional protein structures from contact maps

DOI10.3390/a2010076zbMath1461.92073OpenAlexW2023548857WikidataQ57809290 ScholiaQ57809290MaRDI QIDQ1662462

Luciano Margara, Piero Fariselli, Marco Vassura, Pietro Di Lena, Rita Casadio

Publication date: 20 August 2018

Published in: Algorithms (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.3390/a2010076

zbMATH Keywords

protein foldingcontact mapmolecular modeling

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Uses Software

• FT-COMAR

Cites Work

• Optimization by Simulated Annealing
• Unit disk graph recognition is NP-hard
• Practical mathematical optimization. An introduction to basic optimization theory and classical and new gradient-based algorithms.
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