Estimating a graphical intra-class correlation coefficient (GICC) using multivariate probit-linear mixed models

DOI10.1016/J.CSDA.2015.02.012zbMATH Open1468.62225arXiv1311.4210OpenAlexW2119315205WikidataQ40719284 ScholiaQ40719284MaRDI QIDQ1663261FDOQ1663261

Authors: Chen Yue, Shaojie Chen, Haris I. Sair, Raag Airan, Brian Caffo 

Publication date: 21 August 2018

Published in: Computational Statistics and Data Analysis (Search for Journal in Brave)

Abstract: Data reproducibility is a critical issue in all scientific experiments. In this manuscript, we consider the problem of quantifying the reproducibility of graphical measurements. We generalize the concept of image intra-class correlation coefficient (I2C2) and propose the concept of the graphical intra-class correlation coefficient (GICC) for such purpose. The concept of GICC is based on multivariate probit-linear mixed effect models. We will present a Markov Chain EM (MCEM) algorithm for estimating the GICC. Simulations results with varied settings are demonstrated and our method is applied to the KIRBY21 test-retest dataset.

Full work available at URL: https://arxiv.org/abs/1311.4210

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zbMATH Keywords

graphical intra class correlation coefficientMCMCEMmultivariate probit-linear mixed model

Mathematics Subject Classification ID

Computational methods for problems pertaining to statistics (62-08) Probabilistic graphical models (62H22)

Cites Work

• Multilevel functional principal component analysis
• Simple and Globally Convergent Methods for Accelerating the Convergence of Any EM Algorithm
• Title not available (Why is that?)
• Maximum Likelihood Variance Components Estimation for Binary Data
• Some results on the multivariate truncated normal distribution
• Ascent-Based Monte Carlo Expectation– Maximization
• A Measure of Similarity between Graph Vertices: Applications to Synonym Extraction and Web Searching
• Graph similarity scoring and matching
• Maximum Likelihood Estimation for Probit-Linear Mixed Models with Correlated Random Effects
• Confidence Interval Estimation of the Intraclass Correlation Coefficient for Binary Outcome Data
• Estimating Intraclass Correlation for Binary Data

Uses Software

• Stata
• tmvtnorm

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