Granger causality-based synaptic weights estimation for analyzing neuronal networks

DOI10.1007/S10827-015-0550-ZMaRDI QIDQ1704884zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Pei-Chiang Shao, Jian-Jia Huang, Wei-Chang Shann, Chen-Tung Yen, Meng-Li Tsai, Chien-Chang Yen

Publication date 13 March 2018

Published in Journal of Computational Neuroscience (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10827-015-0550-z

zbMATH Keywords

Granger causality analysisneuronal networkssynaptic weights estimationvector autoregressive model

Mathematics Subject Classification ID

Neural networks for/in biological studies, artificial life and related topics (92B20) Neural biology (92C20) Systems biology, networks (92C42)

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Cites work

• A Method for Selecting the Bin Size of a Time Histogram
• Autoregressive models for gene regulatory network inference: sparsity, stability and causality issues
• Decoding Poisson spike trains by Gaussian filtering
• Distinguishing Causal Interactions in Neural Populations
• Effects of spike sorting error on the Granger causality index
• Estimating the directed information to infer causal relationships in ensemble neural spike train recordings
• Granger causality: basic theory and application to neuroscience
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• scientific article; zbMATH DE number 2199188 (Why is no real title available?)
• Introduction to time series modeling. Translated from the Japanese by the author
• Investigating Causal Relations by Econometric Models and Cross-spectral Methods
• Partial directed coherence: a new concept in neural structure determination
• Pooled spike trains of correlated presynaptic inputs as realizations of cluster point processes
• Probing Changes in Neural Interaction During Adaptation

Cited in

(7)

• Evaluation of connectivity estimates using spiking neuronal network models
• Distinguishing Causal Interactions in Neural Populations
• Statistical analysis of single-trial Granger causality spectra
• Effects of spike sorting error on the Granger causality index
• A study of problems encountered in Granger causality analysis from a neuroscience perspective
• Extracting neuronal functional network dynamics via adaptive Granger causality analysis
• The extended Granger causality analysis for Hodgkin-Huxley neuronal models

Describes a project that uses

Uses Software

• GCCA
• MVGC

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