A hidden Markov model for decoding and the analysis of replay in spike trains

DOI10.1007/s10827-016-0621-9zbMath1382.92042arXiv1412.6469OpenAlexW2275524300WikidataQ39394301 ScholiaQ39394301MaRDI QIDQ1705043

Matt W. Jones, Nick Whiteley, Marc Box

Publication date: 14 March 2018

Published in: Journal of Computational Neuroscience (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1412.6469

zbMATH Keywords

hidden Markov modeldecodinghippocampusspike train modellingspike train replay

Mathematics Subject Classification ID

Computational methods in Markov chains (60J22) Neural biology (92C20)

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Uses Software

• BayesDA

Cites Work

• Estimating the dimension of a model
• Generalized Dirichlet distribution in Bayesian analysis
• Permutation, parametric and bootstrap tests of hypotheses.
• Improved Similarity Measures for Small Sets of Spike Trains
• Sequential Imputations and Bayesian Missing Data Problems
• Bayesian Methods for Hidden Markov Models
• Sequential Monte Carlo Methods for Dynamic Systems
• Bayes Factors
• Neural Representation of Spatial Topology in the Rodent Hippocampus
• Inference and Model Choice for Sequentially Ordered Hidden Markov Models
• Error bounds for convolutional codes and an asymptotically optimum decoding algorithm
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