Random drift particle swarm optimisation algorithm for highly flexible protein-ligand docking

DOI10.1016/j.jtbi.2018.08.034zbMath1406.92181WikidataQ91250876 ScholiaQ91250876MaRDI QIDQ1712669

Peng Zhang

Publication date: 31 January 2019

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2018.08.034

zbMATH Keywords

evolutionary computation; particle swarm optimisation; autodock software; protein-ligand docking

Mathematics Subject Classification ID

90C59: Approximation methods and heuristics in mathematical programming

92C40: Biochemistry, molecular biology

68T20: Problem solving in the context of artificial intelligence (heuristics, search strategies, etc.)

92-04: Software, source code, etc. for problems pertaining to biology

Uses Software

• AutoDock
• Python
• DeepVS
• DockingApp
• GalaxyDock
• GalaxySite
• SODOCK
• jMetalCpp