Testing for gene-gene interaction in case-control GWAS

DOI10.4310/SII.2017.V10.N2.A10zbMATH Open1388.62163OpenAlexW2543251469MaRDI QIDQ1748641FDOQ1748641

Authors: Zhongxue Chen 

Publication date: 14 May 2018

Published in: Statistics and Its Interface (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.4310/sii.2017.v10.n2.a10

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zbMATH Keywords

odds ratiocombining \(p\)-valuessingle nucleotide polymorphismasymptotically independent

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Hypothesis testing in multivariate analysis (62H15)

Cited In (17)

• A unified set-based test with adaptive filtering for gene-environment interaction analyses
• A mutual information-based method to select informative pairs of variables in case-control genetic association studies to improve the power of detecting interaction between genetic variants
• Testing for gene-environment and gene-gene interactions under monotonicity constraints
• Detecting essential and removable interactions in genome-wide association studies
• A faster pedigree-based generalized multifactor dimensionality reduction method for detecting gene-gene interactions
• AGGrEGATOr: A Gene-based GEne-Gene interActTiOn test for case-control association studies
• Exploring case-control genetic association tests using phase diagrams
• Testing for gene-gene interaction with AMMI models
• Powerful tests for detecting a gene effect in the presence of possible gene-gene interactions using garrote kernel machines
• minPtest: a resampling based gene region-level testing procedure for genetic case-control studies
• Multiple testing for SNP-SNP interactions
• A survey of statistical methods for gene-gene interaction in case-control genome-wide association studies
• Robust tests for gene-environment interaction in case-control and case-only designs
• Gene-centric gene-gene interaction: a model-based kernel machine method
• Testing differential networks with applications to the detection of gene-gene interactions
• A mixed two-stage method for detecting interactions in genomewide association studies
• A fast algorithm for detecting gene-gene interactions in genome-wide association studies

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