Modeling protein cores with Markov random fields

DOI10.1016/0025-5564(94)90041-8zbMATH Open0819.92008OpenAlexW1991768096WikidataQ30418979 ScholiaQ30418979MaRDI QIDQ1804853FDOQ1804853

Authors: James V. White, Ilya B. Muchnik, Temple F. Smith 

Publication date: 31 August 1995

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/0025-5564(94)90041-8

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zbMATH Keywords

Markov random fieldssecondary structurecontact graphsscoring functiontertiary structuresamino acid position environmentsinverse protein folding problemprotein domain coresprotein structure models

Mathematics Subject Classification ID

Random fields (60G60) Biochemistry, molecular biology (92C40) Markov processes (60J99)

Cites Work

• On measures of information and their characterizations
• Markov random fields and their applications
• Protein classification by stochastic modeling and optimal filtering of amino-acid sequences

Cited In (4)

• Towards a general probabilistic model of protein structure: the reference ratio method
• Model-Based Assignment and Inference of Protein Backbone Nuclear Magnetic Resonances
• Probabilistic Models of Local Biomolecular Structure and Their Applications
• Model of protein fragments and statistical potentials

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