Determining distinct clusters in gene expression data using similarity in principal component subspaces

DOI10.1007/S12572-012-0055-1MaRDI QIDQ1933017zbMATH OpenOpenAlexFDO

Authors Sudhakar Jonnalagadda, Rajagopalan Srinivasan

Publication date 22 January 2013

Published in International Journal of Advances in Engineering Sciences and Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s12572-012-0055-1

zbMATH Keywords

clusteringPCAcluster validation

Mathematics Subject Classification ID

Factor analysis and principal components; correspondence analysis (62H25) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Measures of association (correlation, canonical correlation, etc.) (62H20) Biochemistry, molecular biology (92C40)

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Cites work

• scientific article; zbMATH DE number 49702 (Why is no real title available?)
• Bayes Factors
• Between-Groups Comparison of Principal Components
• Cluster validation techniques for genome expression data
• MCLUST: Software for model-based cluster analysis
• On clustering validation techniques
• Silhouettes: a graphical aid to the interpretation and validation of cluster analysis
• Well-Separated Clusters and Optimal Fuzzy Partitions

Cited in

(3)

• Use of SVD-based probit transformation in clustering gene expression profiles
• scientific article; zbMATH DE number 6874149 (Why is no real title available?)
• Rough Sets, Fuzzy Sets, Data Mining, and Granular Computing

Describes a project that uses

Uses Software

• mclust
• Silhouettes

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