Bayesian optimization approaches for identifying the best genotype from a candidate population

DOI10.1007/S13253-021-00454-2MaRDI QIDQ2084441zbMATH OpenOpenAlexFDO

Authors Shin-Fu Tsai, Chih-Chien Shen, Chen-Tuo Liao

Publication date 18 October 2022

Published in Journal of Agricultural, Biological and Environmental Statistics (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://doi.org/10.1007/s13253-021-00454-2

zbMATH Keywords

expected improvementGBLUP modelgenomic predictiongenomic selectionlinear mixed effects model

Mathematics Subject Classification ID

Applications of statistics to environmental and related topics (62P12)

Cites work

• Constrained Bayesian optimization with noisy experiments
• Convergence rates of efficient global optimization algorithms
• Efficient global optimization of expensive black-box functions
• Global optimization of expensive-to-evaluate functions: An empirical comparison of two sampling criteria
• Global optimization of stochastic black-box systems via sequential kriging meta-models
• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• Optimization of selective phenotyping and population design for genomic prediction
• Statistical and computational challenges in whole genome prediction and genome-wide association analyses for plant and animal breeding
• Tolerance intervals for unbalanced one-way random effects models with covariates and heterogeneous variances

Cited in

(2)

• Optimization and phenotype allocation
• A modified Bayesian optimization approach for determining a training set to identify the best genotypes from a candidate population in genomic selection

Describes a project that uses

Uses Software

• EGO
• BGLR

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