Computational modelling of nephron progenitor cell movement and aggregation during kidney organogenesis

DOI10.1016/J.MBS.2021.108759zbMATH Open1486.92022OpenAlexW4226031857MaRDI QIDQ2118503FDOQ2118503

Authors: Pauli Tikka, Moritz Mercker, Ilya Skovorodkin, Ulla Saarela, Seppo Vainio, Veli-Pekka Ronkainen, James P. Sluka, James A. Glazier, Anna Marciniak-Czochra, Franz Schaefer 

Publication date: 22 March 2022

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.mbs.2021.108759

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zbMATH Keywords

particle swarm optimizationcellular Potts modelself-organizing mapsCompuCell3Dearly nephrogenesisPython analysis functions

Mathematics Subject Classification ID

Developmental biology, pattern formation (92C15) Cell movement (chemotaxis, etc.) (92C17)

Cites Work

• Self-organized formation of topologically correct feature maps

Cited In (2)

• Dynamic modeling of branching morphogenesis of ureteric bud in early kidney development
• Modelling cellular interactions and dynamics during kidney morphogenesis

Uses Software

• CompuCell3D
• GitHub
• MiniSom

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