Identification of protein functions in mouse with a label space partition method

DOI10.3934/mbe.2022176zbMath1489.92049OpenAlexW4210965861MaRDI QIDQ2130449

Xuan Li, Lin Lu, Lei Chen

Publication date: 25 April 2022

Published in: Mathematical Biosciences and Engineering (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.3934/mbe.2022176

zbMATH Keywords

multi-label classificationprotein functionlabel space partitionmouse proteinRAKEL

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

Uses Software

• word2vec
• node2vec
• iMPTCE-Hnetwork
• DeepWalk

Cites Work

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• A similarity-based method for prediction of drug side effects with heterogeneous information
• Support-vector networks
• ECS: an automatic enzyme classifier based on functional domain composition
• Fast unfolding of communities in large networks
• Random forests

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