Protein noise and distribution in a two-stage gene-expression model extended by an mRNA inactivation loop

DOI10.1007/978-3-030-85633-5_13zbMath1491.92051OpenAlexW3203028928MaRDI QIDQ2142119

Pavol Bokes, Abhyudai Singh, Candan Çelik

Publication date: 25 May 2022

Full work available at URL: https://doi.org/10.1101/2021.04.22.440897

zbMATH Keywords

generating functionmaster equationstochastic simulationstochastic gene expressionanalytical distribution

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Related Items

Joint distribution of protein concentration and cell volume coupled by feedback in dilution

Uses Software

• GillesPy

Cites Work

• Transcriptional bursting diversifies the behaviour of a toggle switch: hybrid simulation of stochastic gene expression
• Exact and approximate distributions of protein and mRNA levels in the low-copy regime of gene expression
• Stochastic methods. A handbook for the natural and social sciences
• Markovian modelling of gene product synthesis
• Fluctuating-rate model with multiple gene states
• Analytic solutions for stochastic hybrid models of gene regulatory networks
• Using Gene Expression Noise to Understand Gene Regulation
• Approximation and inference methods for stochastic biochemical kinetics—a tutorial review
• Stochastic hybrid systems for studying biochemical processes
• Approximate Moment Dynamics for Chemically Reacting Systems
• Univariate Discrete Distributions