An efficient procedure to assist in the re-parametrization of structurally unidentifiable models

DOI10.1016/J.MBS.2020.108328MaRDI QIDQ2173063zbMATH OpenOpenAlexWikidataFDO

Authors D. Joubert, Johannes D. Stigter, Jaap Molenaar

Publication date 22 April 2020

Published in Mathematical Biosciences (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International

Full work available at URL https://doi.org/10.1016/j.mbs.2020.108328

zbMATH Keywords

correlated parameter setsre-parametrizationstate transformationstructural identifiabilitysystems biology

Mathematics Subject Classification ID

Pathology, pathophysiology (92C32) Systems biology, networks (92C42) Microbiology (92C70)

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Cites work

• A fast algorithm to assess local structural identifiability
• A hybrid symbolic-numerical method for determining model structure
• A procedure for generating locally identifiable reparametrisations of unidentifiable nonlinear systems by the similarity transformation approach
• An algorithm for finding globally identifiable parameter combinations of nonlinear ODE models using Gröbner bases
• Determining identifiable parameter combinations using subset profiling
• Determining the parametric structure of models
• Differential algebra methods for the study of the structural identifiability of rational function state-space models in the biosciences
• Extensions to a procedure for generating locally identifiable reparameterisations of unidentifiable systems
• Finding identifiable parameter combinations in nonlinear ODE models and the rational reparameterization of their input-output equations
• Fonctionnelles causales non linéaires et indéterminées non commutatives
• scientific article; zbMATH DE number 439900 (Why is no real title available?)
• scientific article; zbMATH DE number 3538668 (Why is no real title available?)
• scientific article; zbMATH DE number 6159604 (Why is no real title available?)
• Identifiable reparametrizations of linear compartment models
• Minimal output sets for identifiability
• New results for identifiability of nonlinear systems
• Observability of complex systems
• On the identifiability and distinguishability of nonlinear parametric models
• Parallel codes for computing the numerical rank
• Parameter identifiability of nonlinear systems: The role of initial conditions.
• Procedures for parameter and state estimation of microbial growth process models
• Structural identifiability in linear time-invariant systems

Cited in

(4)

• Parameterization of mechanistic models from qualitative data using an efficient optimal scaling approach
• Computing parameter identifiability and other structural properties for natural resource models
• Identifiable specializations for ODE models
• SMT based parameter identifiable combination detection for non-linear continuous and hybrid dynamics

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