Modelling the evolution of genetic regulatory networks

DOI10.1016/J.JTBI.2005.06.020MaRDI QIDQ2194971zbMATH OpenOpenAlexWikidataFDO

Authors Yanyan Li

Publication date 7 September 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://eprints.soton.ac.uk/261443/1/Quayle.pdf

zbMATH Keywords

artificial genomeBoolean network modelevolutiongene expressiongenetic algorithmgenetic regulatory networks

Mathematics Subject Classification ID

Systems biology, networks (92C42) Genetics and epigenetics (92D10) Problems related to evolution (92D15)

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Cites work

• Emergence of Scaling in Random Networks
• scientific article; zbMATH DE number 3168330 (Why is no real title available?)
• Modeling the complexity of genetic networks: Understanding multigenic and pleiotropic regulation.

Cited in

(30)

• Reliability of regulatory networks and its evolution
• Gene and epigene networks: two levels in organizing the hereditary system
• Model checking the evolution of gene regulatory networks
• Evolvability and robustness: a paradox restored
• Computational mechanisms in genetic regulation by RNA
• Algebraic connectivity may explain the evolution of gene regulatory networks
• Monte Carlo simulation of a simple gene network yields new evolutionary insights
• Genetic redundancy caused by gene duplications and its evolution in networks of transcriptional regulators
• The influence of assortativity on the robustness and evolvability of gene regulatory networks upon gene birth
• Modelling evolution of regulatory networks in artificial bacteria
• Complex networks evolutionary dynamics using genetic algorithms
• Modeling evolutionary growth of a microRNA-mediated regulation system
• Genetic Regulatory Networks and Co-Regulation of Genes: A Dynamic Model Based Approach
• Metanetworks of artificially evolved regulatory networks
• EMERGENT NETWORK STRUCTURE, EVOLVABLE ROBUSTNESS, AND NONLINEAR EFFECTS OF POINT MUTATIONS IN AN ARTIFICIAL GENOME MODEL
• ANALYSIS OF PREFERENTIAL NETWORK MOTIF GENERATION IN AN ARTIFICIAL REGULATORY NETWORK MODEL CREATED BY DUPLICATION AND DIVERGENCE
• scientific article; zbMATH DE number 1966524 (Why is no real title available?)
• Genome parameters as information to forecast emergent developmental behaviors
• scientific article; zbMATH DE number 1901180 (Why is no real title available?)
• The Effects of Gene Recruitment on the Evolvability and Robustness of Pattern-Forming Gene Networks
• A model of gene expression and regulation in an artificial cellular organism.
• Gene regulatory networks: a discrete model of dynamics and topological evolution
• scientific article; zbMATH DE number 5032055 (Why is no real title available?)
• MODELING GENETIC REGULATORY NETWORKS: CONTINUOUS OR DISCRETE?
• Structure of genetic regulatory networks: evidence for scale free networks
• EMERGENCE OF REGULATORY NETWORKS IN SIMULATED EVOLUTIONARY PROCESSES
• Patterning by genetic networks
• Genetic networks: processing data, regulatory network modelling and their analysis
• Evolutionary design of oscillatory genetic networks
• Gibbs field approach for evolutionary analysis of regulatory signal of gene expression

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