A flexible computational framework for detecting, characterizing, and interpreting statistical patterns of epistasis in genetic studies of human disease susceptibility
DOI10.1016/J.JTBI.2005.11.036zbMATH Open1447.92258OpenAlexW2076220518WikidataQ28295511 ScholiaQ28295511MaRDI QIDQ2199193FDOQ2199193
Authors: Jason H. Moore, Joshua C. Gilbert, Chia-Ti Tsai, Fu-Tien Chiang, Todd Holden, Nate Barney, Bill C. White 
Publication date: 16 September 2020
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2005.11.036
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entropydata miningmachine learninggene-gene interactionsconstructive inductionmultifactor dimensionality reduction
Applications of statistics to biology and medical sciences; meta analysis (62P10) Statistical aspects of big data and data science (62R07) Genetics and epigenetics (92D10) Pathology, pathophysiology (92C32)
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Cited In (19)
- Using a reduced topology af an artificial neural network to identify biological initeraction in genetic epidemiology for two-locus disease models
- A general framework for and new normalization of attributable proportion
- A mutual information-based method to select informative pairs of variables in case-control genetic association studies to improve the power of detecting interaction between genetic variants
- Asymptotic distributions of empirical interaction information
- An optimization approach to epistasis detection
- Bayesian epistasis association mapping via SNP imputation
- Detecting essential and removable interactions in genome-wide association studies
- Information metrics in genetic epidemiology
- The geometry of partial fitness orders and an efficient method for detecting genetic interactions
- Mining susceptibility gene modules and disease risk genes from SNP data by combining network topological properties with support vector regression
- Detecting epistasis via Markov bases
- Kernel-based measure of variable importance for genetic association studies
- An entropy-based approach for testing genetic epistasis underlying complex diseases
- Building up a robust risk mathematical platform to predict colorectal cancer
- A new technique for generating pathogenic barcodes in breast cancer susceptibility analysis
- A fast algorithm for detecting gene-gene interactions in genome-wide association studies
- A computational method to detect epistatic effects contributing to a quantitative trait
- FAACOSE: a fast adaptive ant colony optimization algorithm for detecting SNP epistasis
- An epistasis and heterogeneity analysis method based on maximum correlation and maximum consistence criteria
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