Modeling the onset of virulence in a pectinolytic bacterium

DOI10.1016/J.JTBI.2006.08.010MaRDI QIDQ2209074zbMATH OpenOpenAlexWikidataFDO

Authors Sylvie Reverchon, William Nasser, Jacques-Alexandre Sepulchre

Publication date 28 October 2020

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2006.08.010

zbMATH Keywords

\textit{Erwinia chrysanthemi}gene regulatory networkpectinasespiecewise-affine differential equations

Mathematics Subject Classification ID

Systems biology, networks (92C42) Microbiology (92C70) Genetics and epigenetics (92D10)

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Cites work

• A class of piecewise linear differential equations arising in biological models
• Combinatorial explosion in model gene networks.
• Dynamical behaviour of biological regulatory networks. I: Biological role of feedback loops and practical use of the concept of the loop- characteristic state
• Molecular interaction maps as information organizers and simulation guides
• Positive and negative circuits in dynamical systems
• Qualitative simulation of genetic regulatory networks using piecewise-linear models
• Qualitative simulation of the initiation of sporulation in \textit{Bacillus subtilis}
• Slow manifolds
• Splitting the dynamics of large biochemical interaction networks

Cited in

(4)

• Importance of metabolic coupling for the dynamics of gene expression following a diauxic shift in \textit{Escherichia coli}
• DYNAMICS OF THE TRANSITION TO PATHOGENICITY INERWINIA CHRYSANTHEMI
• Mathematical modelling of bacterial quorum sensing: a review
• CTRL: extension of CTL with regular expressions and fairness operators to verify genetic regulatory networks

Describes a project that uses

Uses Software

• GNA

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