Inference of synaptic connectivity and external variability in neural microcircuits

DOI10.1101/650069zbMath1451.92010OpenAlexW3007352162WikidataQ89813271 ScholiaQ89813271MaRDI QIDQ2210968

Cody Baker, Robert Rosenbaum, Andreas S. Tolias, Emmanouil Froudarakis, Dimitri Yatsenko

Publication date: 10 November 2020

Published in: Journal of Computational Neuroscience (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/s10827-020-00739-4

zbMATH Keywords

calcium imagingfunctional connectivitysynaptic connectivitynoise correlations

Mathematics Subject Classification ID

Biomedical imaging and signal processing (92C55) Neural networks for/in biological studies, artificial life and related topics (92B20)

Related Items (1)

Reconstruction of sparse recurrent connectivity and inputs from the nonlinear dynamics of neuronal networks

Uses Software

• PRMLT

Cites Work

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• A mathematical framework for inferring connectivity in probabilistic neuronal networks
• Stochastic methods. A handbook for the natural and social sciences
• PRMLT
• Adjusted regularization of cortical covariance
• Reconstruction of recurrent synaptic connectivity of thousands of neurons from simulated spiking activity
• Reconstruction of sparse connectivity in neural networks from spike train covariances
• Differential Covariance: A New Class of Methods to Estimate Sparse Connectivity from Neural Recordings

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