Positivity preserving finite difference methods for Poisson-Nernst-Planck equations with steric interactions: application to slit-shaped nanopore conductance

DOI10.1016/j.jcp.2019.108864zbMath1453.65213OpenAlexW2965928901WikidataQ127407635 ScholiaQ127407635MaRDI QIDQ2222532

Shenggao Zhou, Zhongming Wang, Jie Ding

Publication date: 27 January 2021

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2019.108864

zbMATH Keywords

positivitycondition numberPoisson-Nernst-Planck equationsnanopore conductancesteric interactions

Mathematics Subject Classification ID

Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Applications to the sciences (65Z05) Motion of charged particles (78A35)

Related Items (17)

Structure-preserving and efficient numerical methods for ion transport ⋮ A Structure-Preserving JKO Scheme for the SizeModified Poisson-Nernst-Planck-Cahn-Hilliard Equations ⋮ A positive and energy stable numerical scheme for the Poisson-Nernst-Planck-Cahn-Hilliard equations with steric interactions ⋮ A structure-preserving finite element discretization for the time-dependent Nernst-Planck equation ⋮ Adaptive finite element approximation for steady-state Poisson-Nernst-Planck equations ⋮ A Maxwell–Ampère Nernst–Planck Framework for Modeling Charge Dynamics ⋮ Fast iterative method for local steric Poisson-Boltzmann theories in biomolecular solvation ⋮ Structure-preserving numerical method for Maxwell-Ampère Nernst-Planck model ⋮ Convergence analysis of structure‐preserving numerical methods for nonlinear Fokker–Planck equations with nonlocal interactions ⋮ Energy dissipative and positivity preserving schemes for large-convection ion transport with steric and solvation effects ⋮ Structure-Preserving Numerical Methods for Nonlinear Fokker--Planck Equations with Nonlocal Interactions by an Energetic Variational Approach ⋮ Efficient, positive, and energy stable schemes for multi-d Poisson-Nernst-Planck systems ⋮ Unconditionally positivity preserving and energy dissipative schemes for Poisson-Nernst-Planck equations ⋮ An iteration solver for the Poisson-Nernst-Planck system and its convergence analysis ⋮ A positivity-preserving, energy stable and convergent numerical scheme for the Poisson-Nernst-Planck system ⋮ Modified Poisson--Nernst--Planck Model with Coulomb and Hard-sphere Correlations ⋮ A dynamic mass transport method for Poisson-Nernst-Planck equations

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