Harnessing the information theory and chaos game representation for pattern searching among essential and non-essential genes in bacteria

DOI10.1016/J.JTBI.2021.110917MaRDI QIDQ2235595zbMATH OpenOpenAlexFDO

Authors Adrian Kania

Publication date 21 October 2021

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2021.110917

zbMATH Keywords

information theoryessential geneschaos game representationDNA walk

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Applications of game theory (91A80) Microbiology (92C70)

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Cites work

• Comparative analysis of bacterial essential and nonessential genes with Hurst exponent based on chaos game representation
• Elements of Information Theory
• Moments of inertia of spectra and distribution moments as molecular descriptors

Cited in

(4)

• A bioinformatics approach to the determination of genes involved in endophytic behavior in \textit{Burkholderia} spp.
• Comparative analysis of bacterial essential and nonessential genes with Hurst exponent based on chaos game representation
• Comparative genomics via wavelet analysis for closely related bacteria
• Can power laws help us understand gene and proteome information?

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