Splitting strategy for simulating genetic regulatory networks

DOI10.1155/2014/683235zbMath1307.92298OpenAlexW2110674105WikidataQ41966693 ScholiaQ41966693MaRDI QIDQ2262586

Ibrahim Hussein Musa, Xiong You, Xueping Liu

Publication date: 16 March 2015

Published in: Computational \& Mathematical Methods in Medicine (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1155/2014/683235

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Systems biology, networks (92C42)

Related Items (5)

Exponentially fitted two-derivative Runge-Kutta methods for simulation of oscillatory genetic regulatory systems ⋮ Steady-state-preserving simulation of genetic regulatory systems ⋮ Efficient exponential methods for genetic regulatory systems ⋮ Unnamed Item ⋮ Novel phase-fitted symmetric splitting methods for chemical oscillators

Cites Work

• New explicit adapted Numerov methods for second-order oscillatory differential equations
• Extended RKN-type methods for numerical integration of perturbed oscillators
• Genetic oscillation deduced from Hopf bifurcation in a genetic regulatory network with delays
• Practical symplectic partitioned Runge-Kutta and Runge-Kutta-Nyström methods
• Limit-cycle-preserving simulation of gene regulatory oscillators
• Two-step extended RKN methods for oscillatory systems
• Trigonometrically-fitted Scheifele two-step methods for perturbed oscillators
• Symmetric and symplectic ERKN methods for oscillatory Hamiltonian systems
• Dependence of the period on the rate of protein degradation in minimal models for circadian oscillations
• On the Construction and Comparison of Difference Schemes

This page was built for publication: Splitting strategy for simulating genetic regulatory networks