A hybrid and exploratory approach to knowledge discovery in metabolomic data

DOI10.1016/J.DAM.2018.11.025MaRDI QIDQ2286393zbMATH OpenOpenAlexFDO

Authors Dhouha Grissa, Blandine Comte, Mélanie Pétéra, Estelle Pujos-Guillot, Amedeo Napoli

Publication date 22 January 2020

Published in Discrete Applied Mathematics (Search for Journal in Brave)

Full work available at URL https://hal.inria.fr/hal-02195463/file/grissa-etal-dam20.pdf

zbMATH Keywords

classificationvisualizationformal concept analysisinterpretationpattern miningdata and pattern explorationhybrid knowledge discoverymetabolomic data

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Biochemistry, molecular biology (92C40) Knowledge representation (68T30)

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Cites work

• scientific article; zbMATH DE number 3637090 (Why is no real title available?)
• scientific article; zbMATH DE number 1249514 (Why is no real title available?)
• scientific article; zbMATH DE number 1332320 (Why is no real title available?)
• 10.1162/153244303322753616
• Exploratory knowledge discovery over web of data
• Gene selection for cancer classification using support vector machines
• Hermes: a simple and efficient algorithm for building the AOC-poset of a binary relation
• Inductive Logic Programming
• Machine learning. The art and science of algorithms that make sense of data.
• Random forests
• Scalable estimates of concept stability

Cited in

(4)

• Multiple pattern associations for interpreting structural and functional characteristics of biomolecules
• Hyperbolic Hopfield neural networks for image classification in content-based image retrieval
• Explaining mixture models through semantic pattern mining and banded matrix visualization
• Computing stable extensions of argumentation frameworks using formal concept analysis

Describes a project that uses

Uses Software

• Hermes
• LatViz

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