Activatable tiles for compact robust programmable molecular assembly and other applications

DOI10.1007/S11047-015-9532-3MaRDI QIDQ2311273zbMATH OpenOpenAlexFDO

Authors Urmi Majumder, Sudhanshu Garg, Thomas H. LaBean, J. Reif

Publication date 10 July 2019

Published in Natural Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s11047-015-9532-3

zbMATH Keywords

concentration systemsdeprotection systemsDNA self-assemblyerror correctionprogrammable molecular machinesreaction catalyzationstrand displacementtile-assembly model

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

Recommendations

• Programmable control of nucleation for algorithmic self-assembly
• DNA Computing
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• An introduction to tile-based self-assembly

Cites work

• ACTIVE TILE SELF-ASSEMBLY, PART 2: SELF-SIMILAR STRUCTURES AND STRUCTURAL RECURSION
• Active tile self-assembly. I: Universality at temperature 1
• Asynchronous signal passing for tile self-assembly: fuel efficient computation and efficient assembly of shapes
• Capabilities and Limits of Compact Error Resilience Methods for Algorithmic Self-assembly in Two and Three Dimensions
• Complexity of Compact Proofreading for Self-assembled Patterns
• Design and Simulation of Self-repairing DNA Lattices
• DNA Computing
• DNA Computing
• DNA Computing
• DNA Computing
• Error suppression mechanisms for DNA tile self-assembly and their simulation
• Exponential replication of patterns in the signal tile assembly model
• Hierarchical self assembly of patterns from the Robinson tilings: DNA tile design in an enhanced tile assembly model
• Invadable self-assembly: combining robustness with efficiency
• Parallelism and time in hierarchical self-assembly
• Programmable control of nucleation for algorithmic self-assembly
• Running time and program size for self-assembled squares
• Staged self-assembly: nanomanufacture of arbitrary shapes with \(O(1)\) glues
• Theory and practice of natural computing. Second international conference, TPNC 2013, Cáceres, Spain, December 3--5, 2013. Proceedings

Cited in

(8)

• Optimizing tile set size while preserving proofreading with a DNA self-assembly compiler
• Hierarchical self assembly of patterns from the Robinson tilings: DNA tile design in an enhanced tile assembly model
• Programmable control of nucleation for algorithmic self-assembly
• The effect of malformed tiles on tile assemblies within kTAM
• Activatable Tiles: Compact, Robust Programmable Assembly and Other Applications
• DNA Computing
• DNA Computing
• Error suppression mechanisms for DNA tile self-assembly and their simulation

Describes a project that uses

Uses Software

• GitHub

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