Information-theoretic approaches to SVM feature selection for metagenome read classification

DOI10.1016/j.compbiolchem.2011.04.007zbMath1366.92080OpenAlexW2101393542WikidataQ51554280 ScholiaQ51554280MaRDI QIDQ2362468

Gail Rosen, Vinay Gadia, Joseph DePasquale, Robi Polikar, Elaine Garbarine

Publication date: 10 July 2017

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2011.04.007

zbMATH Keywords

information theorysupport vector machinesmetagenomics

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Genetics and epigenetics (92D10) Information theory (general) (94A15)

Uses Software

• MEGAN
• TACOA
• TETRA

Cites Work

• Knowing what doesn't matter: exploiting the omission of irrelevant data
• An information-theoretic perspective of tf--idf measures.
• 10.1162/153244303322753616
• 10.1162/153244303322753643
• 10.1162/153244303322753661
• 10.1162/153244303322753742
• Information Theoretic Learning
• Gene selection for cancer classification using support vector machines

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