Bayesian semiparametric model for pathway-based analysis with zero-inflated clinical outcomes

DOI10.1007/S13253-016-0264-3zbMATH Open1367.62304OpenAlexW2519667455MaRDI QIDQ2363720FDOQ2363720

Authors Lulu Cheng, In Young Kim, Herbert Pang 

Publication date 26 July 2017

Published in Journal of Agricultural, Biological and Environmental Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s13253-016-0264-3

zbMATH Keywords

Gaussian processmarginal likelihoodmixed modelzero-inflated Poissonpathway based analysisunknown link

Mathematics Subject Classification ID

Bayesian inference (62F15) Nonparametric regression and quantile regression (62G08) Applications of statistics to environmental and related topics (62P12)

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Cites Work

• scientific article; zbMATH DE number 4102269 (Why is no real title available?)
• scientific article; zbMATH DE number 720686 (Why is no real title available?)
• scientific article; zbMATH DE number 3189754 (Why is no real title available?)
• A note on acceptance rate criteria for CLTS for Metropolis–Hastings algorithms
• Flexible variable selection for recovering sparsity in nonadditive nonparametric models
• Generalized linear models with unknown link functions
• Incorporating biological information into linear models: a Bayesian approach to the selection of pathways and genes
• Inference from iterative simulation using multiple sequences
• Logistic regression models.
• Marginal Likelihood From the Metropolis–Hastings Output
• Markov Chain Monte Carlo Convergence Diagnostics: A Comparative Review
• Negative Binomial Regression
• Powerful tests for detecting a gene effect in the presence of possible gene-gene interactions using garrote kernel machines
• Practical Markov Chain Monte Carlo
• Semiparametric Regression of Multidimensional Genetic Pathway Data: Least‐Squares Kernel Machines and Linear Mixed Models

Cited In (3)

• A Bayesian nonparametric model for zero‐inflated outcomes: Prediction, clustering, and causal estimation
• Semiparametric kernel-based regression for evaluating interaction between pathway effect and covariate
• Statistical properties on semiparametric regression for evaluating pathway effects

Uses Software

• COUNT
• boost

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