A fast algorithm for the construction of universal footprinting templates in DNA

DOI10.1007/S00285-005-0357-ZMaRDI QIDQ2369299zbMATH OpenOpenAlexWikidataFDO

Authors James W. Anderson, Keith R. Fox, Graham Niblo

Publication date 9 May 2006

Published in Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL https://eprints.soton.ac.uk/29879/1/dna_final.pdf

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40) Paths and cycles (05C38)

Recommendations

• Applications of graph theory in DNA sequencing by hybridization
• Succinct de Bruijn graphs
• The adjoints of DNA graphs
• Characterizations for some types of DNA graphs
• scientific article; zbMATH DE number 5831723

Cites work

• scientific article; zbMATH DE number 3637904 (Why is no real title available?)
• An Eulerian path approach to DNA fragment assembly

Cited in

(2)

• Designing q-unique DNA sequences with integer linear programs and Euler tours in de Bruijn graphs
• deBruijn-like sequences and the irregular chromatic number of paths and cycles

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