Piecewise-linear models of genetic regulatory networks: equilibria and their stability
From MaRDI portal
Publication:2369327
Recommendations
- State transition graph and stability of singular equilibria for piecewise linear biological models
- Stability of stationary solutions of piecewise affine differential equations describing gene regulatory networks
- Filippov solutions in the analysis of piecewise linear models describing gene regulatory networks
- scientific article; zbMATH DE number 5872239
- Differential inclusions and Filippov solutions in the analysis of piecewise linear models describing gene regulatory networks
Cites work
- scientific article; zbMATH DE number 41285 (Why is no real title available?)
- scientific article; zbMATH DE number 50840 (Why is no real title available?)
- scientific article; zbMATH DE number 3484411 (Why is no real title available?)
- scientific article; zbMATH DE number 1956635 (Why is no real title available?)
- scientific article; zbMATH DE number 1798190 (Why is no real title available?)
- A calculus for computing Filippov's differential inclusion with application to the variable structure control of robot manipulators
- A class of piecewise linear differential equations arising in biological models
- A methodological basis for description and analysis of systems with complex switch-like interactions
- Analysis and generic properties of gene regulatory networks with graded response functions
- Analysis of continuous-time switching networks
- Compensator based output feedback sliding mode controller design
- Computation of piecewise quadratic Lyapunov functions for hybrid systems
- Dynamical behaviour of biological regulatory networks. I: Biological role of feedback loops and practical use of the concept of the loop- characteristic state
- Dynamical systems: Stability theory and applications
- Dynamics and bifurcations of non-smooth mechanical systems
- Global analysis of steady points for systems of differential equations with sigmoid interactions
- Grazing, skipping and sliding: Analysis of the non-smooth dynamics of the DC/DC buck converter
- Hybrid Systems: Computation and Control
- Hybrid Systems: Computation and Control
- Identification of all steady states in large networks by logical analysis
- Logical identification of all steady states: The concept of feedback loop characteristic states
- Lyapunov functions for Lotka-Volterra predator-prey models with optimal foraging behavior
- Lyapunov stability theory of nonsmooth systems
- Molecular interaction maps as information organizers and simulation guides
- Multiple Lyapunov functions and other analysis tools for switched and hybrid systems
- Optimization and nonsmooth analysis
- Periodic solutions in systems of piecewise- linear differential equations
- Planar systems of piecewise linear differential equations with a line of discontinuity
- Qualitative dynamics of piecewise-linear differential equations: a discrete mapping approach
- Qualitative simulation of genetic regulatory networks using piecewise-linear models
- Qualitative simulation of the initiation of sporulation in \textit{Bacillus subtilis}
- Sliding modes in control and optimization. Transl. from the Russian
- Stable oscillations in mathematical models of biological control systems
- The increasingly complex structure of the bifurcation tree of a piecewise-smooth system
Cited in
(86)- Computing Equilibrium Points of Genetic Regulatory Networks
- Oscillations and multiple equilibria in microvascular blood flow
- Genetically Regulated Metabolic Networks: Gale-Nikaido Modules and Differential Inequalities
- Qualitative simulation of genetic regulatory networks using piecewise-linear models
- Sensitive dependence on initial conditions in gene networks
- scientific article; zbMATH DE number 5872239 (Why is no real title available?)
- Introduction to focus issue: quantitative approaches to genetic networks
- Robust \(\mu\)-stability analysis of Markovian switching uncertain stochastic genetic regulatory networks with unbounded time-varying delays
- Stability of stationary solutions of piecewise affine differential equations describing gene regulatory networks
- A class of piecewise linear differential equations arising in biological models
- Uncovering operational interactions in genetic networks using asynchronous Boolean dynamics
- Structural stability for 2-dimensional piecewise smooth vector fields where the switching manifold is a double discontinuity
- Hierarchy of models: From qualitative to quantitative analysis of circadian rhythms in cyanobacteria
- Periodic solutions of gene networks with steep sigmoidal regulatory functions
- Design of regulation and dynamics in simple biochemical pathways
- Modeling gene regulatory networks with piecewise linear differential equations
- Robust stabilization and \(H_\infty\) controllers design for stochastic genetic regulatory networks with time-varying delays and structured uncertainties
- Dynamics of a driven oscillator carrying a freely sliding mass
- Embedded control of cell growth using tunable genetic systems
- Multistability and oscillations in genetic control of metabolism
- Stochastic stability of Markovian switching genetic regulatory networks
- Exact control of genetic networks in a qualitative framework: the bistable switch example
- Polynomial representations of piecewise-linear differential equations arising from gene regulatory networks
- Piecewise Smooth Models of Pumping a Child's Swing
- A survey of numerical methods for IVPs of ODEs with discontinuous right-hand side
- BIPOLAR LINEAR ALGEBRA AND YINYANG-N-ELEMENT CELLULAR NETWORKS FOR EQUILIBRIUM-BASED BIOSYSTEM SIMULATION AND REGULATION
- Dynamics of simple balancing models with time-delayed switching feedback control
- Fundamental matrix solutions of piecewise smooth differential systems
- Periodic oscillations for nonmonotonic smooth negative feedback circuits
- Time-delayed models of gene regulatory networks
- Piecewise linear and Boolean models of chemical reaction networks
- scientific article; zbMATH DE number 2104186 (Why is no real title available?)
- Robust \(H_\infty\) control of discrete switched system with time delay
- On the use of blowup to study regularizations of singularities of piecewise smooth dynamical systems in \(\mathbb{R}^3\)
- Convergence properties of posttranslationally modified protein-protein switching networks with fast decay rates
- On the Gause predator-prey model with a refuge: a fresh look at the history
- Limit cycles in piecewise-affine gene network models with multiple interaction loops
- Nonlinear and temporal multiscale dynamics of gene regulatory networks: a qualitative simulator
- Loss of determinacy at small scales, with application to multiple timescale and nonsmooth dynamics
- Comparing different ODE modelling approaches for gene regulatory networks
- Stability and bifurcation analysis of Filippov food chain system with food chain control strategy
- Filippov solutions in the analysis of piecewise linear models describing gene regulatory networks
- Applying differential dynamic logic to reconfigurable biological networks
- Numerical simulation of piecewise-linear models of gene regulatory networks using complementarity systems
- A survey on piecewise-linear models of regulatory dynamical systems
- Discrete time piecewise affine models of genetic regulatory networks
- Convergence and synchronization in networks of piecewise-smooth systems via distributed discontinuous coupling
- Dynamical systems coupled with monotone set-valued operators: formalisms, applications, well-posedness, and stability
- A modelling framework for gene regulatory networks including transcription and translation
- Computational techniques to locate crossing/sliding regions and their sets of attraction in non-smooth dynamical systems
- Set-values filtering for discrete time-delay genetic regulatory networks with time-varying para\-meters
- Links between topology of the transition graph and limit cycles in a two-dimensional piecewise affine biological model
- On the equivalence between the sigmoidal approach and Utkin's approach for piecewise-linear models of gene regulatory networks
- Continuous-switch piecewise quadratic models of biological networks: application to bacterial growth
- Passivity analysis for stochastic Markovian switching genetic regulatory networks with time-varying delays
- Differential inclusions and Filippov solutions in the analysis of piecewise linear models describing gene regulatory networks
- Microbial metabolism and growth under conditions of starvation modelled as the sliding mode of a differential inclusion
- Control design for sustained oscillation in a two-gene regulatory network
- Equilibria and their stability in networks with steep sigmoidal nonlinearities
- Qualitative Behavior of a Metabolic Pathway with Hybrid Feedback
- Chaotic dynamics in an electronic model of a genetic network
- Periodicity in piecewise-linear switching networks with delay
- Qualitative control of undesired oscillations in a genetic negative feedback loop with uncertain measurements
- On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
- Sliding motion on discontinuity surfaces of high co-dimension. A construction for selecting a Filippov vector field
- Topology-induced dynamics in a network of synthetic oscillators with piecewise affine approximation
- State transition graph and stability of singular equilibria for piecewise linear biological models
- Dynamical analysis in a piecewise smooth predator–prey model with predator harvesting
- A model for the hepatic glucose metabolism based on Hill and step functions
- Modeling and analysis of gene regulatory networks
- Stability of genetic regulatory networks with interval time-varying delays and stochastic perturbation
- A Stability Result for Periodic Solutions of Nonmonotonic Smooth Negative Feedback Systems
- Regularizing piecewise smooth differential systems: co-dimension 2 discontinuity surface
- Probabilistic approach for predicting periodic orbits in piecewise affine differential models
- Stability analysis for genetic regulatory networks with delays: the continuous-time case and the discrete-time case
- Analytic solutions for the circadian oscillator characterize cycle dynamics and its robustness
- A new prescribed-time stability theorem for impulsive piecewise-smooth systems and its application to synchronization in networks
- Dynamics of complex feedback architectures in metabolic pathways
- Global dynamics for switching systems and their extensions by linear differential equations
- Structural principles for complex dynamics in glass networks
- Explicit construction of chaotic attractors in Glass networks
- A Lyapunov function for piecewise-independent differential equations: stability of the ideal free distribution in two patch environments
- Structural principles for periodic orbits in Glass networks
- Local Identification of Piecewise Deterministic Models of Genetic Networks
- Two-fold singularities in nonsmooth dynamics -- higher dimensional analogs
- Inferring parameters of prey switching in a 1 predator-2 prey plankton system with a linear preference tradeoff
This page was built for publication: Piecewise-linear models of genetic regulatory networks: equilibria and their stability
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q2369327)
