Investigation of a new GRASP-based clustering algorithm applied to biological data

DOI10.1016/J.COR.2009.02.014zbMATH Open1183.68494OpenAlexW2014381197WikidataQ57739753 ScholiaQ57739753MaRDI QIDQ2379645FDOQ2379645

Authors: Mariá C. V. Nascimento, Franklina M. B. Toledo, André C. P. L. F. de Carvalho 

Publication date: 19 March 2010

Published in: Computers \& Operations Research (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.cor.2009.02.014

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zbMATH Keywords

clusteringgene expression databioinformaticsGRASP

Mathematics Subject Classification ID

Learning and adaptive systems in artificial intelligence (68T05) Genetics and epigenetics (92D10)

Cites Work

• J-MEANS: A new local search heuristic for minimum sum of squares clustering
• Finding Groups in Data
• Connectivity of the mutual \(k\)-nearest-neighbor graph in clustering and outlier detection
• A scatter search heuristic for the capacitated clustering problem
• Cluster analysis and mathematical programming
• Consensus clustering: A resampling-based method for class discovery and visualization of gene expression microarray data
• Integer Programming and the Theory of Grouping
• Cluster Analysis and Mathematical Programming
• A probabilistic heuristic for a computationally difficult set covering problem
• GRASP and Path Relinking for 2-Layer Straight Line Crossing Minimization
• GRASP heuristic with path-relinking for the multi-plant capacitated lot sizing problem
• A scatter search approach for the minimum sum-of-squares clustering problem
• Title not available (Why is that?)
• Title not available (Why is that?)
• Title not available (Why is that?)
• An evolutionary technique based on K-means algorithm for optimal clustering in \({\mathbb R}^{N}\)

Cited In (7)

• A biased random-key genetic algorithm for data clustering
• A novel mixed integer linear programming model for clustering relational networks
• Community detection by modularity maximization using GRASP with path relinking
• Title not available (Why is that?)
• Clustering of high throughput gene expression data
• The use of the hyperbolic smoothing clustering algorithm in taxonomy of macroalgae
• A graph clustering algorithm based on a clustering coefficient for weighted graphs

Uses Software

• J-MEANS
• UCI-ml
• CPLEX
• MOCK
• clusfind
• CLUSTAG

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