Interplay between microbial trait dynamics and population dynamics revealed by the combination of laboratory experiment and computational approaches

DOI10.1016/J.JTBI.2017.02.014MaRDI QIDQ2402307zbMATH OpenOpenAlexWikidataFDO

Authors Kenta Suzuki, Yuji Yamauchi, Takehito Yoshida

Publication date 7 September 2017

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2017.02.014

zbMATH Keywords

simulated annealingapproximate Bayesian computationphenotypic plasticitymicrobial dynamicsinducible defensefilament formation

Mathematics Subject Classification ID

Physiological, cellular and medical topics (92C99) Population dynamics (general) (92D25) Computational methods for problems pertaining to biology (92-08)

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Cites work

• Optimization by simulated annealing
• Sequential Monte Carlo without likelihoods

Cited in

(1)

• Predicting stability of mixed microbial cultures from single species experiments. I: Phenomenological model

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