A tutorial introduction to Bayesian inference for stochastic epidemic models using approximate Bayesian computation
From MaRDI portal
Publication:2407283
DOI10.1016/j.mbs.2016.07.001zbMath1377.92091OpenAlexW2485609644WikidataQ38905048 ScholiaQ38905048MaRDI QIDQ2407283
Peter Neal, Dennis Prangle, Theodore Kypraios
Publication date: 29 September 2017
Published in: Mathematical Biosciences (Search for Journal in Brave)
Full work available at URL: https://eprint.ncl.ac.uk/fulltext.aspx?url=228043/A0EA6741-E960-4F95-9803-D4DFC1E81AED.pdf&pub_id=228043
epidemicsBayesian inferenceapproximate Bayesian computationpopulation Monte Carlostochastic epidemic models
Epidemiology (92D30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Bayesian inference (62F15) Computational methods for problems pertaining to biology (92-08)
Related Items
Direct statistical inference for finite Markov jump processes via the matrix exponential, An approximate likelihood perspective on ABC methods, Accelerating Bayesian inference for stochastic epidemic models using incidence data, Posterior predictive checking for partially observed stochastic epidemic models, On predictive inference for intractable models via approximate Bayesian computation, A rare event approach to high-dimensional approximate Bayesian computation, Modeling COVID-19 pandemic using Bayesian analysis with application to Slovene data, Global dynamics of deterministic and stochastic epidemic systems with nonmonotone incidence rate, Approximate Bayesian computation and simulation-based inference for complex stochastic epidemic models, Bayesian inference of spreading processes on networks, Approximate Bayesian computational methods for the inference of unknown parameters, Spectral density-based and measure-preserving ABC for partially observed diffusion processes. An illustration on Hamiltonian SDEs, epiABC, Bayesian inference for multistrain epidemics with application to \textit{Escherichia coli} O157:H7 in feedlot cattle
Uses Software
Cites Work
- Unnamed Item
- Unnamed Item
- Unnamed Item
- A comparative review of dimension reduction methods in approximate Bayesian computation
- An adaptive sequential Monte Carlo method for approximate Bayesian computation
- Efficient likelihood-free Bayesian computation for household epidemics
- Bayesian modelling of an epidemic of severe acute respiratory syndrome
- Epidemics with two levels of mixing
- The rate of convergence for approximate Bayesian computation
- New insights into approximate Bayesian computation
- The use of a single pseudo-sample in approximate Bayesian computation
- Bayesian inference for stochastic epidemic models with time-inhomogeneous removal rates
- Estimation of Parameters for Macroparasite Population Evolution Using Approximate Bayesian Computation
- On the asymptotic distribution of the size of a stochastic epidemic
- Sequential Monte Carlo Samplers
- Bayesian inference of hospital-acquired infectious diseases and control measures given imperfect surveillance data
- Adaptive approximate Bayesian computation
- A simple coupling of renewal processes
- Bayesian Inference for Stochastic Epidemics in Populations with Random Social Structure
- Analyses of Infectious Disease Data from Household Outbreaks by Markov Chain Monte Carlo Methods
- Approximate Bayesian Computation: A Nonparametric Perspective
- Sequential Monte Carlo without likelihoods
- Exact Bayesian Inference and Model Selection for Stochastic Models of Epidemics Among a Community of Households
- Bayesian analysis for emerging infectious diseases