Bayesian hidden Markov tree models for clustering genes with shared evolutionary history

DOI10.1214/18-AOAS1208zbMath1417.62319arXiv1808.06109OpenAlexW2963151618WikidataQ128060054 ScholiaQ128060054MaRDI QIDQ2415483

Shaoyang Ning, Sarah E. Calvo, Jun S. Liu, Yang Li, Vamsi K. Mootha

Publication date: 22 May 2019

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1808.06109

zbMATH Keywords

Dirichlet process mixture modelco-evolutionevolutionary historygene function predictiontree-structured hidden Markov model

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Markov processes: estimation; hidden Markov models (62M05) Protein sequences, DNA sequences (92D20)

Uses Software

• clime

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