Thermostats for ``slow configurational modes

DOI10.1007/s10955-007-9365-2zbMath1128.82006arXivphysics/0412163MaRDI QIDQ2460270

Alex A. Samoletov, Carl P. Dettmann, Mark A. J. Chaplain

Publication date: 14 November 2007

Published in: Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/physics/0412163

zbMATH Keywords

Langevin equation; virial theorem; biomolecule; extended dynamics; thermostat method

Mathematics Subject Classification ID

82C31: Stochastic methods (Fokker-Planck, Langevin, etc.) applied to problems in time-dependent statistical mechanics

81V55: Molecular physics

82D99: Applications of statistical mechanics to specific types of physical systems

82B30: Statistical thermodynamics

Related Items

Observation-based correction of dynamical models using thermostats, A Metropolis adjusted Nosé-Hoover thermostat, Temperature–energy-space sampling molecular dynamics: deterministic and single-replica method utilizing continuous temperature system, A patch that imparts unconditional stability to explicit integrators for Langevin-like equations, Long time behaviour and particle approximation of a generalised Vlasov dynamic, The Langevin limit of the Nosé-Hoover-Langevin thermostat, Comparing the efficiencies of stochastic isothermal molecular dynamics methods, On ergodicity for multidimensional harmonic oscillator systems with Nosé-Hoover-type thermostat, A gentle stochastic thermostat for molecular dynamics, Cumulant analysis of the statistical properties of a deterministically thermostated harmonic oscillator, Adaptive Thermostats for Noisy Gradient Systems, Coupled Nosé–Hoover equations of motions without time scaling, Topological origin of phase transitions in the absence of critical points of the energy landscape, Double density dynamics: realizing a joint distribution of a physical system and a parameter system

Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Unnamed Item
• Time-reversible deterministic thermostats
• Canonical ensembles from chaos
• Introduction to differentiable manifolds.
• A remark on the Kramers problem
• Thermostats: Analysis and application
• Nosé–Hoover nonequilibrium dynamics and statistical mechanics
• Nonlinear dynamics and statistical physics of DNA
• Brownian motion in a field of force and the diffusion model of chemical reactions
• Handbook of stochastic methods for physics, chemistry and the natural sciences.