Extreme value theory in some statistical analysis of genomic sequences

DOI10.1007/S10687-006-0008-9MaRDI QIDQ2463683zbMATH OpenOpenAlexFDO

Authors Lily Wang, Pranab K. Sen

Publication date 16 December 2007

Published in Extremes (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10687-006-0008-9

zbMATH Keywords

maximum profile scoresprotein profilessequence alignments

Mathematics Subject Classification ID

Statistics of extreme values; tail inference (62G32) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Recommendations

• Toward an accurate statistics of gapped alignments
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Cites work

• Extremes and related properties of random sequences and processes
• scientific article; zbMATH DE number 50805 (Why is no real title available?)
• Large Deviation Probabilities for Weighted Sums
• Poisson approximation for dependent trials
• Two moments suffice for Poisson approximations: The Chen-Stein method

Cited in

(1)

• Alignment Statistics for Long-Range Correlated Genomic Sequences

Describes a project that uses

Uses Software

• PSI-BLAST
• BLAST

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