Min-protein oscillations in E. coli : three-dimensional off-lattice stochastic reaction-diffusion model

DOI10.1007/S10955-006-9189-5MaRDI QIDQ2641395zbMATH OpenOpenAlexWikidataFDO

Authors Vladimir Krstić, Željka Maglica, Hana Čipčić Paljetak, Boris Podobnik, N. Pavin

Publication date 20 August 2007

Published in Journal of Statistical Physics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10955-006-9189-5

zbMATH Keywords

reaction-diffusionstochasticEscherichia coliMinD oscillationsMinE ringoff-lattice

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Applications of stochastic analysis (to PDEs, etc.) (60H30) Statistical mechanics of polymers (82D60) Biophysics (92C05)

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(6)

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• A model of oscillatory protein dynamics in bacteria
• Cellular automata simulation of self-organization in the bacterial MinCDE system
• Derivation of stochastic partial differential equations for reaction-diffusion processes
• The effect of boundary conditions on the mesoscopic lattice Boltzmann method: Case study of a reaction-diffusion based model for Min-protein oscillation
• A lattice Boltzmann method for modeling min proteins oscillation in Escherichia coli

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